Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882490.1_cds_XP_016438180.1_33870
CDS Infomation

[gene=LOC107764155] [db_xref=GeneID:107764155] [protein=spartin-like] [protein_id=XP_016438180.1] [location=join(7843..8888,10206..10372,11921..12005,12389..12590)] [gbkey=CDS]
Sequence

ATGTATGAAACTACCCATTTTACGCGTTTGGCCTATTATTACCTTTTCTGCTTCTCTCTG
AAGTCTGAACTTCATCTCTCGTCTTCTCTACTCCATTCCTCCATTTTCAACTTCACTTTG
ATCTCTTCTTCAATGGCTTCCCTAAACCCTAATACTTCTCGAACCCCAATGTATCCCCAA
GTAGTCATTGACCAAAATACCCCTTTCCCCCCTTCCTCCTCCTCCCGTCAAAATCTCTAC
CCGACCATTGACATGAACGACCTCGTTGAAAACCTCTTTCCAGAAAATGACCAATTTACC
CCTAACGAGCAGCATTATTCACCGTCTGCCCCTCTTGAAACCCTCGAAGAAACCCTACTC
ACTATCCCCGGTTCCATTCTCCATTTGATCGACACACACTACTCCGTCGAACTCGCCTCC
GGCGACTTATCCGTTCACCGTCTCCGGCAAGACAACAGCGTCGTCGCTGTCCTCGTTCGT
GTCGGAAACGAAATCCAGTGGCCGTTGACTAAGGACCTTGCCGCCGTAAAACTCGACGAT
TCACGCTACTTTTTCTCATTTCAAGCTCCTAAAGATGACGAATCGGATAAGGAATCATCG
GCTAATGACTTGGAGAATGAATCGTTGAATTATGGTTTAACGATTGCTTCCAAAGGTCAG
GAGAAATTACTAAAGGAGCTGGATGGCATTTTGGAAAATTATAGCAACTTTGCGGTGCAG
AAAGTGGAGGAGAAGGCCGCAGCGGTGTTGGGCGGACCGGTGCCGAAGGAGTTGTCTCCG
GCGGATTTGAAGTCGGAGAAGAAGAAGGAAGTGTTGGAAGAGCGATGCGCGGCGTATTGG
ACCACATTGGCGCCTAATGTGGAGGAGTATAATGCCTCGGCGGCAAAGTATGTGGCTTCG
GGGTCAGGACACTTGATAAAGGGGATTTTGTGGTGTGGAGATGTGACTGCGGATAGATTG
AAGTGGGGGAATGAGGTATTGAAGAATAGGTTTAAGACAGGTTCGAAAACTGAGGTTAGT
CCTGAGACATTGAAGAGGATCAAAAGGGTTAAGAGAGTAACAAAGATGACTGAGAAAGTG
GCGGTTGGAGTCCTTTCTGGAGCTGTGAAGGTTTCAGGATTCGTTACCAGGTCAGTTGCA
AATACCAAAGCAGGAAAAAAGTTCTTTAGCCTCCTGCCTGGGGAAATGGTTCTTGCTACT
CTTGATGGATTTAGCAGAATATGTGATGCTGTTGAAGTAGCTGGAAAGAATGTGATGTCT
ACATCAAGCACTGTCACGACTGAATTTGTTTCTCACAGGTATGGAGAAGAAGCAGCTAAG
GCAACCAGTGAAGGGCTTGATGCTGCAGGGCATGCTTTTGGAACTGCCTGGGCTGTGTTT
AAGATCAGAAAGGCACTGAACCCCAAGAGTGCCTTGAAGCCCACTACCTTAGCCAAATCT
GCTGCTAAAGCTGCAGCTGCGGCTGCTAAAGCTGATAAGAAGGCTAAGAGTTCCAAGTAG

Peptide Sequence

PEP ID

XP_016438180.1
PEP Infomation

PREDICTED: spartin-like [Nicotiana tabacum]
Sequence

MYETTHFTRLAYYYLFCFSLKSELHLSSSLLHSSIFNFTLISSSMASLNPNTSRTPMYPQ
VVIDQNTPFPPSSSSRQNLYPTIDMNDLVENLFPENDQFTPNEQHYSPSAPLETLEETLL
TIPGSILHLIDTHYSVELASGDLSVHRLRQDNSVVAVLVRVGNEIQWPLTKDLAAVKLDD
SRYFFSFQAPKDDESDKESSANDLENESLNYGLTIASKGQEKLLKELDGILENYSNFAVQ
KVEEKAAAVLGGPVPKELSPADLKSEKKKEVLEERCAAYWTTLAPNVEEYNASAAKYVAS
GSGHLIKGILWCGDVTADRLKWGNEVLKNRFKTGSKTEVSPETLKRIKRVKRVTKMTEKV
AVGVLSGAVKVSGFVTRSVANTKAGKKFFSLLPGEMVLATLDGFSRICDAVEVAGKNVMS
TSSTVTTEFVSHRYGEEAAKATSEGLDAAGHAFGTAWAVFKIRKALNPKSALKPTTLAKS
AAKAAAAAAKADKKAKSSK

Transcript Sequence

Gene sequence data has not been registered.